PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy012862
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 366aa    MW: 41089.1 Da    PI: 10.228
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542933PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.6e-28298358360
                -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhek 60 
                D y+WrKYGqK++kgs++pr+YY+  ++   gCp++k+ver+ e+p+++++tYegeHnh+k
  Ahy012862 298 DDYSWRKYGQKPIKGSPHPRGYYKXQQHdmrGCPARKHVERCLEEPSMLIVTYEGEHNHPK 358
                99**********************99888889***************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.0E-16254294IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.5E-30284358IPR003657WRKY domain
PROSITE profilePS5081128.047291359IPR003657WRKY domain
SuperFamilySSF1182902.22E-23294358IPR003657WRKY domain
SMARTSM007745.3E-33296358IPR003657WRKY domain
PfamPF031062.1E-24298357IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MEEVEEANRA AVESCHRVLT VLSQPQDQVH YRNLMVETGE AVVRFKKVVS LLSNSLGHAR  60
VRKHKKLQVP FSQSILLDSP ICTRKKHQSK YLKFPQADFH DNSAQELGLT VGKSLSLVAK  120
PALELSSNGN GNGKSPLQLA QQLSSTHYHI LQQQQQQQRA LLLHHQQQQQ QMKHQAEIMY  180
RRNNINNSNN CSSNNNSVIN LNFDNSSSCT PTMSSTRSFI SSLSIDGSVA NMEGSAFHLI  240
GAARSSDQNS QQHKRKCSAR GDEASGGKCH CSKKRKHRVK RSIKVPAISN KLADIPPDDY  300
SWRKYGQKPI KGSPHPRGYY KXQQHDMRGC PARKHVERCL EEPSMLIVTY EGEHNHPKLS  360
TQSANA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-17289356771WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253275KRKCSARGDEASGGKCHCSKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204721.10.0PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-113WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A0B2RD391e-178A0A0B2RD39_GLYSO; Putative WRKY transcription factor 21
TrEMBLA0A0R0KWS71e-178A0A0R0KWS7_SOYBN; Uncharacterized protein
STRINGGLYMA02G15920.11e-177(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.14e-73WRKY DNA-binding protein 21